Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951482.1_cds_XP_016491486.1_81797

CDS Infomation

[gene=LOC107811127] [db_xref=GeneID:107811127] [protein=lysine-specific demethylase JMJ25-like isoform X2] [protein_id=XP_016491486.1] [location=complement(join(15200..15892,15994..16491,16585..16758,16837..16900,17471..17532,18657..18776,19401..19486,19629..19701,21134..21580,21750..22079,23327..24146,24231..24294,24662..24803,24887..24986,25521..25636,26201..26530))] [gbkey=CDS]

Sequence

ATGGAGGTCACTGAACAGTTAGTTGCTCAGCAATATAACAGTGATAAAGAGGAATCTGCT
GAAGTGAGTTTTATTAGGTCAAGGAAGTCAACTAAAATAGCTATGGAGAAATTAAAGGGA
ATTAATCAGCAATTGGATGAATGGGATGAAGAAGACAGAAATATAGGTAGAAAAAGAAGG
GGTAAAAATGAGAAAATTGGGAGTAAGAAAAAGTGTAAAAGCCAGAAGCTTGACGGAGAA
GAAATAGTTGAAGCAGGATCAGATTCTGGAAGATATTCTGTGCGACAAATGAAATCAAAT
CCCCGAAACAGAAAGAGGAAGGATGAAAATGGGAATGAGTTTGAATCAAATATGTGTCAT
CAGTGCCAGAGGAATGACAAAGGAAGGGTTGTTCGTTGCACCAACTGTAGAATGAAGCGA
TATTGTGTTCCTTGCATGACCAGATGGTACCCTGGGATGCCTGAGGAGGCTTTTGTCGAG
TCTTGTCCTGTTTGTTGTCAAATCTGTAATTGCAAAGCATGCTTACGCCTAGACGGGCCT
ATAAGGGCTTTGAAGAACTTACGATTTGAGATCAGTGAAGAAGAAAAGGTTCAATATTCT
AAATTTATCTTGCAAAAACTTTTGCCTCTCTTGAGAAGAATCAATGCAGAGCAAGTGATG
GAGATGGAGATTGAAGCTAAGATTCAAGGATTACCAGTGTCAAATGTAAAGCTGCAGAAG
GAAAAGTGTCATAGGAATGAGCGAGTGTACTGCGATAACTGCCAAACATCCATTGTTGAT
TTTCACAGAAATTGTTCCAGCTGTTCGTATGATCTTTGCCTTACTTGTTGCCGGGAGCTT
AGAGATGGTCATCTTAAGGGAGGTGAAGAAGTCATCATTGAATTCAAAGACAAAGGTGAT
GCTTATTTGCATGGTGATATGATAGCTAATAATAGAACTTCAAGGAGTAGATTTTCCCAG
AACAAGAAGATTGACAATAATCCCGTGGGAGATGCCAAGTTTGCATATGAAATGGAGCCT
AGGGATAATGGAGGGCTTCCGCCAGAGAATTCTGGTGGTCGTGCTGGTGAATGGAAATCC
AATGTAGATGGCAGCATCCCTTGTCCACCAGAGAATTTTGGTGGCTGTGGTAAGGGAAGT
TTAGAGCTGAAGTGCCTGCTGTCAAATTCAAAGAATCCGGTCTCTGAGTTGTTGGCAAAG
GCTGAATATATTGCCAAAAGATGTGAACTGGAACACATGCCTCAAATACCTCAGAGGTCA
TGCTTATGTATAAAATTAGTTGATGAAACTGATGTGCAGAAAAGTAAATTGCGTAAAGCA
GCATCACGTGACGATTCAGATGACAATTATTTATACTGTCCAGCAGCTAAAGATCTTCAG
CAGGAGGATCTGAAGCATTTCCAGTGTCATTGGCTGAAAGGTGAGCCTGTGATTGTTAGT
AATGTGCATGAAACTGCGTCAGGGTTAAGTTGGGAGCCCATGGTTATGTGGAGAGCGTGT
CGCCAGATGAAGAACTTAAGACATCCCATTCTTTTGGATGTCAGCGCCATCAACTCATTG
GATTGGTGTGAGTTGGAGATAAATATTCACCAGTTTTTCAAAGGGTACATGGAGGGTCGC
TTTGACAGTTATGGGTGGCCTCAACTCTTAAAGTTGAATGACTGGCCACCATCAGGTCTA
TTTGATGAGCGGCTGCCCCGTCATGGTGCAGAATTTTGTAGCTGTTTACCTTTTAAGGAG
TATACACATCCTCAACATGGCTATCTCAATCTAGCTCTAAAACTTCCTGATAATTGTTTG
AAGCCAGATTTGGGGCCTAAGGCATACATTGCTTATGGTTTTCCGAAGGAGCTTGGACGT
GGAGACTCAGTCACCAAGCTGCATTACTATGTGTCTGATACGGTGTTTTTGTTGATGCAC
ACTCAAGCTGCCGTCCCAACAGCTGATCAGCTCTCGGCCATAGAGAACCTGAAACAGAAG
CACAAAGCGCAGGATGAGAAGGAATTTGCAACTGATGTTTGCAGGACTCATGGGAGGATT
AAGGATTGGGTCCCTAGTGTAAATGGAAAAACTTTCTTGAATGAGCTGAGCGTTTCTCAG
GAGAAGCAGAACTGTGATGGTTTGGAAGTGGAGAAAAGTAATAAAGCTGAGAAAAAGAAG
TATAGCCAGCAAGGTGTGGAAGCAGATTGTGAAACAAATGGAGAGGCAGACCAATTTCAA
AATAGAGAAGACGCAGACGGTGGTGCTCTATGGGATGTCTTTAGGAGGAAAGATATTCCT
GAACTGGAGGAATATCTCAGGAAGCACTTTAGGGAATTTCGGCACATATATGGCTCACCA
TTGCTGCAGGTTGCTCACCCCATTCATGATGAAACTTTCTACTTGAGCACAGAGCATAAA
AGGAGACTAAAGGAAGAATACGGCATTGAACCATGGACTTTTGTTCAAAAATTAGGTGAA
GCTGTTTTTATTCCTGCTGGATGCCCTCATCAAATCAGAAATTTAAAGTCCTGCATCAAT
GTTGCTGTTGATTTTGTTTCACCTGAAAATGTGAATGAGTGCATCCGTTTGACCGAGGAG
TTTCGCCAGCTTCCCAGAAATCATGTTGCTAGAGAAGATAAGTTGGAGGTAAAGAATATA
ATTGTTCGTGCAGTGAGCCAAGCAGTGGATCATTTGGAGAAAACAACATTGCACACGGAA
TCAGGCATTGTTACCGGATCATCCTCATCAATTCTGATCAGCGAACGTATAAATGATATG
CCAACACCAAGTATGCGAAAATCTTCCCCCGTTTTGGAAGATCTATCTGGCAAGAGTGCC
AAAAGAGAAGAATATGTTGCTCCAACTGAGGATGAGAAACCAAGAACTGCTAAAGTTAAT
CTATATTCTCCACTTACAAATTCTGTTCATTTGTCTTCAGCAAGCAAGGCTCAAGAAAGC
ATATTTGTTCCTAGTCAAAAGTTAGAGCAGTCCAATTTAGAGGATGTGGAATTCCACTCA
GTTCAATCATTCACGAAGTCTTTGCCAGAGCAGTATTCGAGCACACAATCAGGCCAATCT
TCCTCCATTTTGGAAGATCTTTATAGTGGAAAGACTACCAAAACAAAACAATATGTTGTT
CCAACTGAGGATGAGAAACCAAGAACTGTTAAAGTTGATCTATATTCTCCACTTCCAGAT
TTTGTTGATTTTTCTTCAGCAAACAAGGTTCCCAAAAGAGAGGAATATGTTGCTCTAAAT
GAGGATGAGAAGCCAAGAACTGCTGAAGTTAATCTACATTCTCCACATCCAGATTTTGTT
CGTTTATCTTCAGCACACAAGGTTCCCAAAAGAGAAGAATATGTTGCTCCAAGTGAGAAT
GAGAAACCAAGAACTGCTAAATTTACTCCACTTCCTGATCTTGTTCATTTGTCTTCAGCA
GACAAGGCTCAAGAAAGCACATCCGTTCCTTGTCAAAAGTTAAAGCAGTCCAATTCGGAA
GAGGTGGAATTCCAATCGGCTCAGTCATTCTCGAAGTCTTTGCCAGAGCAGTATTCCGGC
GCAGAATCAGGTCTCTGGAGCAACAATGATTCAACCCGAATGCTCAAAAAATTAATATTT
GATTGCTCAATCAGACTGTCTTTAGAGGCATTGGCTGACCCAGTGAACGAAGAAGAAATG
TATGGTGCAATTGCTGCTTTAAATGAAGATCCCTCATCGTTTAGTGATGAACATGCCAAG
CAATTGGTAAAACTTAAGAATGAATTCCCTATCATGGTTAAGAAATGGAGGAACTTGGCA
CAAGCTGAATCAAGTTACCAGGAATTCTTGACCAACTTTGAAGAGGATAGGAAAAAACTG
GATGATTGGAATAGATTAGAAGCAAAGTTGATGGCGGAGTATGTGAAAAAGGAGGAGCAA
GCTAGAGAATTGGAAGCAGCGCTTCAAACTATAAAGACCAGGCAGAAACAAATCATGGAC
GAAAGACTAGAAGCCACCCGAGAGGCTCAACGCATTGTCTTGTTAGCTCAAGAAAAAGTC
AGGAAGATCGATAGCACCAAAAGTAAATTGGCAACAACAAAGATGGAAATGGATAGCTTG
ATAAAAAATTGGTCCAGTTTCCAGTCTTCATTCCCTTAG

Peptide Sequence

PEP ID

XP_016491486.1

PEP Infomation

PREDICTED: lysine-specific demethylase JMJ25-like isoform X2 [Nicotiana tabacum]

Sequence

MEVTEQLVAQQYNSDKEESAEVSFIRSRKSTKIAMEKLKGINQQLDEWDEEDRNIGRKRR
GKNEKIGSKKKCKSQKLDGEEIVEAGSDSGRYSVRQMKSNPRNRKRKDENGNEFESNMCH
QCQRNDKGRVVRCTNCRMKRYCVPCMTRWYPGMPEEAFVESCPVCCQICNCKACLRLDGP
IRALKNLRFEISEEEKVQYSKFILQKLLPLLRRINAEQVMEMEIEAKIQGLPVSNVKLQK
EKCHRNERVYCDNCQTSIVDFHRNCSSCSYDLCLTCCRELRDGHLKGGEEVIIEFKDKGD
AYLHGDMIANNRTSRSRFSQNKKIDNNPVGDAKFAYEMEPRDNGGLPPENSGGRAGEWKS
NVDGSIPCPPENFGGCGKGSLELKCLLSNSKNPVSELLAKAEYIAKRCELEHMPQIPQRS
CLCIKLVDETDVQKSKLRKAASRDDSDDNYLYCPAAKDLQQEDLKHFQCHWLKGEPVIVS
NVHETASGLSWEPMVMWRACRQMKNLRHPILLDVSAINSLDWCELEINIHQFFKGYMEGR
FDSYGWPQLLKLNDWPPSGLFDERLPRHGAEFCSCLPFKEYTHPQHGYLNLALKLPDNCL
KPDLGPKAYIAYGFPKELGRGDSVTKLHYYVSDTVFLLMHTQAAVPTADQLSAIENLKQK
HKAQDEKEFATDVCRTHGRIKDWVPSVNGKTFLNELSVSQEKQNCDGLEVEKSNKAEKKK
YSQQGVEADCETNGEADQFQNREDADGGALWDVFRRKDIPELEEYLRKHFREFRHIYGSP
LLQVAHPIHDETFYLSTEHKRRLKEEYGIEPWTFVQKLGEAVFIPAGCPHQIRNLKSCIN
VAVDFVSPENVNECIRLTEEFRQLPRNHVAREDKLEVKNIIVRAVSQAVDHLEKTTLHTE
SGIVTGSSSSILISERINDMPTPSMRKSSPVLEDLSGKSAKREEYVAPTEDEKPRTAKVN
LYSPLTNSVHLSSASKAQESIFVPSQKLEQSNLEDVEFHSVQSFTKSLPEQYSSTQSGQS
SSILEDLYSGKTTKTKQYVVPTEDEKPRTVKVDLYSPLPDFVDFSSANKVPKREEYVALN
EDEKPRTAEVNLHSPHPDFVRLSSAHKVPKREEYVAPSENEKPRTAKFTPLPDLVHLSSA
DKAQESTSVPCQKLKQSNSEEVEFQSAQSFSKSLPEQYSGAESGLWSNNDSTRMLKKLIF
DCSIRLSLEALADPVNEEEMYGAIAALNEDPSSFSDEHAKQLVKLKNEFPIMVKKWRNLA
QAESSYQEFLTNFEEDRKKLDDWNRLEAKLMAEYVKKEEQARELEAALQTIKTRQKQIMD
ERLEATREAQRIVLLAQEKVRKIDSTKSKLATTKMEMDSLIKNWSSFQSSFP

Transcript Sequence

Gene sequence data has not been registered.